WRF-Chem Tools for the Community

 

For general discussion and questions, please refer to the WRF-Chem Discussion Forum.

Please see the Best Practices 2015 Tutorial Presentation that includes example namelists for running with MOZCART and MOZART-MOSAIC.

WRF-Chem Tutorial Presentation on "Biogenic, Fire, Lightning Emissions and Chemical Boundary Conditions" (August 2015).

Chemical Options

MOZART + GOCART (MOZCART)  Chem_opt = 112
MOZART + MOSAIC 4 bins     Chem_opt = 201 
MOZART + MOSAIC 4 bins + AQCHEM  Chem_opt = 202

The MOZART-4 mechanism contains a detailed description of tropospheric inorganic chemistry and of organic species with 3 carbons or less, and a reasonably thorough treatment of isoprene chemistry. Larger alkanes and alkenes, terpenes, and aromatics are also included in the mechanism, albeit with lumping and simplification. The MOZART-4 chemical mechanism and model description are published in Emmons et al. (2010). In MOZCART, the gas-phase chemistry is connected with the GOCART bulk aerosol scheme. More information on running WRF-Chem with the MOZCART chemical mechanism can be found in the MOZCART User's Guide. Pre-processor tools for running WRF-Chem / MOZCART can be obtained from the Download section below.

In MOZART_MOSAIC, the gas-phase chemistry is coupled with the MOSAIC sectional aerosol scheme. The MOZART gas-phase chemistry was extended to include detailed treatment of monoterpenes (a-pinene, b-pinene, limonene) and MBO (Hodzic et al., in prep.), aromatics, HONO, C2H2, as well as an updated isoprene oxidation scheme (Knote et al., 2014). More information on running WRF-Chem with the MOZART/MOSAIC chemical mechanism can be found in the MOZART_MOSAIC User's Guide.

With WRF-Chem V3.9 a new TUV photolysis option has been included (phot_opt=4). This option requires an additional data file. Please refer to the Instructions on how to run WRF-Chem with the new TUV photolysis option.

Processors

mozbc: Create lateral boundary and initial conditions from a global chemistry model NCAR/ACOM has developed a program to create time-varying chemical lateral boundary conditions for WRF-Chem from MOZART-4 output. I For questions about running mozbc please contact: Stacy Walters (stacy at ucar . edu), Mary Barth (barthm at ucar . edu), or Gabriele Pfister (pfister at ucar . edu). For technical details please refer to this document: Conversion of MOZART species to WRF-Chem. To obtain mozbc, see the Download section below.
IMPORTANT: Please note that mozbc is not yet working with the hybrid sigma-pressure vertical coordinate introduced with WRF V3.9.

We ask users of the WRF-Chem preprocessor tools to include in any publications the following acknowledgement:
"We acknowledge use of the WRF-Chem preprocessor tool {mozbc, fire_emiss, etc.} provided by the Atmospheric Chemistry Observations and Modeling Lab (ACOM) of NCAR."

To obtain MOZART output files use the MOZART Download page. Note that mozbc also has the option to set species to a single fixed value. This is especially relevant for long-lived and well distributed species (e.g. CH4, H2 or N2O) if they are not on the global model output.

We ask users of the MOZART output for boundary conditions to cite Emmons et al. [GMD, 2010] and include the following acknowledgement:
"We acknowledge use of MOZART-4 global model output available at http://www.acom.ucar.edu/wrf-chem/mozart.shtml. "

Upper boundary conditions for chemical species
Download input files for running WRF-Chem V3.3.1 with Chemical Upper Boundary Conditions: UBC_inputs.tar

bio_emiss: Create MEGAN input for WRF-Chem.
To obtain bio_emiss, see the Download section below.

anthro_emiss: Create anthropogenic emissions files from global emission inventories
This is a fortran based preprocessor to create WRF-Chem ready anthropogenic emissions files (wrfchemi__ or wrfchemi_{00z,12z}_) from global inventories on a lat/lon projection. Users are strongly advised to consult the README files before compiling and using the code. See the Download section below.

anthro_emiss with EDGAR-HTAP emissions: For users who like to use the anthro_emiss tool with the global EDGAR-HTAP emission inventory (http://edgar.jrc.ec.europa.eu/national_reported_data/htap.php) we provide inputs needed for mapping to the MOZART/MOZAIC and MOZART/GOCART chemical options. This package has been provided by Rajesh Kumar (rkumar@ucar.edu).

fire_emiss: Create fire emissions files
Fortran based preprocessor for creating fire emission inputs for WRF-Chem when running with plumerise and also for creating fire emission inputs for the MOZART-4 and CAM-Chem global models. The fire emissions inventory is based on the Fire Inventory from NCAR (FINN). Both software (fire_emis.tgz) and required FINN input data sets are available at the FINN download page.

The fire_emis.tgz file when uncompressed {tar -zxf fire_emis.tgz} yields three directories {data_files, src, and test} and two readme files {README.WRF.fire and README.GLB.fire }. The data_files directory is empty and is where users should put the FINN files and the wrfinput_dfile(s). The test directory contains two test namelist input files, one for creating WRF inputs and another for creating global inputs. Users are highly advised to read the README files before using the fire emission utility.

Download

Use the Processors Download page to register and retrieve the above software packages.
FINN fire emissions are available at the FINN download page.
MOZART output files can be downloaded from here.

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ACOM | Atmospheric Chemistry Observations & Modeling